PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008222403.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 206aa    MW: 22466.5 Da    PI: 5.7923
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008222403.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.5e-1053100455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    ++ + Ka +L + ++Y++ Lq
  XP_008222403.1  53 SHSLAERARREKISERMKLLQSLVPGC----DQINGKAHVLDEIIKYVQLLQ 100
                     8*************************9....9*****************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.44E-1547115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.04E-947104No hitNo description
PROSITE profilePS5088814.7864999IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.0E-1550109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.8E-853100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.3E-755105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MVSEEEGERK GKKQRKQNGS EAKKQSKFAA ASAEGVQRDG VRVKARRGEA TDSHSLAERA  60
RREKISERMK LLQSLVPGCD QINGKAHVLD EIIKYVQLLQ NQVECLAAKL AFVDAMLYDD  120
CELNPSTNPC ASDQRLCCLE PPLPFVLEPP CSVQFRSLAD AAPPGTLASL LLTEDQKASL  180
IPQAQDGGSF EDIGKQPAGL DHSCTF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008222403.11e-150PREDICTED: transcription factor bHLH137-like
SwissprotQ93W885e-37BH137_ARATH; Transcription factor bHLH137
TrEMBLM5XQV81e-85M5XQV8_PRUPE; Uncharacterized protein
STRINGVIT_01s0244g00010.t013e-37(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1786056
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.26e-34bHLH family protein